BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H01LP1|AL428450
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1642 1340 0.0
>3x_Contig1642
Length = 16641
Score = 1340 bits (652), Expect = 0.0
Identities = 817/900 (90%), Gaps = 3/900 (0%)
Strand = Plus / Minus
Query: 8 aaacgaaaatattccaatcgactgggcaaactatcgacatttctggtctagaaaacmctg 67
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1022 aaacgaaaatattccaatcgactggg-aaactatcgacatttctggtctagaaaacactg 964
Query: 68 acaatgtacaamgcagctgtcgamtctttaamgagamacmmggttggtttgacaggtatc 127
| ||||||||| | ||||||||| ||||||| |||| || ||||||||||| |||||||
Sbjct: 963 aaaatgtacaaag-agctgtcgaatctttaaagagaaacaaggttggtttgaaaggtatc 905
Query: 128 tggcacactccagccgaccaamccggtcatggctcattgamcgttgctttgagacagcca 187
||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |
Sbjct: 904 tggcacactccagccgaccaaaccggtcatggctcattgaacgttgctttgagaaagcaa 845
Query: 188 ctggmtatyttcgccaatstcgccttgttcammtcmattccmggtgtcaagactagattg 247
|||| ||| ||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 844 ctggatattttcgccaatgtcgccttgttcaaatcaattccaggtgtcaagactagattg 785
Query: 248 actmacatcgacatggttatcmtcmgagacmacmctgamggtgaatmcyctggtttmgma 307
| | ||||||||||||||||| || |||| || |||| ||||||| | ||||||| | |
Sbjct: 784 aataacatcgacatggttatcatcagagaaaacactgaaggtgaatactctggtttagaa 725
Query: 308 cacgamtctgttccmggtgtcgttgamtctttgacgatcmtgaccmgggctaagtcagac 367
||||| |||||||| ||||||||||| ||||||| |||| ||||| |||||||||||||
Sbjct: 724 cacgaatctgttccaggtgtcgttgaatctttgaagatcatgaccagggctaagtcagaa 665
Query: 368 agmcttgcyagattcgcctttsatttcgccttgacacmcmacagacagtcggtctgcgct 427
|| |||| |||||||||||| |||||||||||| | | ||||| ||||||||||||||
Sbjct: 664 agaattgctagattcgcctttgatttcgccttgaaaaacaacagaaagtcggtctgcgct 605
Query: 428 gttcaccmagctaacmtcmtgacattsggtgatggtttgttcagacacaccgttcatgac 487
|||||| ||||||| || ||| ||| |||||||||||||||||| |||||||| ||||
Sbjct: 604 gttcacaaagctaacatcatgaaattgggtgatggtttgttcagaaacaccgttaatgaa 545
Query: 488 attsgtgctaacgmctacccagacctcgatgtccagcccmtcatcgttgacaacgcttcc 547
||| ||||||||| |||||||| ||||||||| || | ||||||||||||||||||||
Sbjct: 544 attggtgctaacgaatacccagaactcgatgtcaagaacatcatcgttgacaacgcttcc 485
Query: 548 ctgccagccgttgccaagccacatcmcttcgctgttttggtgacacccaacttgtccggt 607
||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||
Sbjct: 484 atgcaagctgttgccaagccacatcaattcgatgttttggtgacaccaaacttgtacggt 425
Query: 608 tctctcttgggtcacattggttctgctttgcycggtggtcccggtctagtcccaggtgct 667
||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 424 tctatcttgggtaacattggttctgctttgatcggtggtcccggtctagtcccaggtgct 365
Query: 668 aacttcggtagagaatacgctgtctttgaaccaggttccagacatgttggtttggacatc 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aacttcggtagagaatacgctgtctttgaaccaggttccagacatgttggtttggacatc 305
Query: 728 aagggtcaaaacgttgctaacccaactgctatgatcttgtcctctactctmatgttgaga 787
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 304 aagggtcaaaacgttgctaacccaactgctatgatcttgtcctctactctaatgttgaga 245
Query: 788 catctaggtttgaacgcttacgctgatagamtttccaaagctacatatgatgtcatttct 847
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 244 catctaggtttgaacgcttacgctgatagaatttccaaagctacatatgatgtcatttct 185
Query: 848 gamggtaagtcaac-acaagagacatcggtggttcagcctccacttctgagttcaccaac 906
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gaaggtaagtcaacaacaagagacatcggtggttcagcctccacttctgagttcaccaac 125
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.718 1.35
Gapped
Lambda K H
1.43 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2531
Number of Sequences: 1807
Number of extensions: 2531
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.2 bits)